News and Updates

2008-08-11The Klebsiella pneumoniae database has moved to the Pasteur MLST site.
2008-08-08The MLST scheme for Arcobacter species is now available. This scheme was developed by William Miller (USDA).
2008-06-17A MLST scheme for Streptococcus zooepidemicus has been developed by Andrew Waller and colleagues at the Animal Health Trust and is now available.
2008-05-23A plasmid MLST scheme has been developed by Aurora García-Fernández and Alessandra Carattoli (Istituto Superiore di Sanità) and is now available. This currently includes data for Incompatibility Group I1 plasmids.
2008-03-26mlstdbNet version 2.0.0, the software that runs the databases on this site, has been released. Details of new features can be found in the release notes.
2008-01-15A MLST scheme for Brachyspira species has been developed by Therese Råsbäck (National Veterinary Institute, Sweden) and is now available.
2007-11-14Isolates and profiles can now be queried by exact or partial matches to submitter surnames or affiliations. It is now very easy to search for all isolates submitted by a particular laboratory using a partial match to user affiliation.
2007-09-06A MLST scheme for Vibrio parahaemolyticus is now available. This was developed by Narjol Gonzalez-Escalona (FDA, USA).
2007-08-09mlstdbNet version 1.6 has been released. This is the software that runs the databases on this site. Details of new features can be found in the release notes.
2007-04-03The MLST scheme for Streptomyces is now available. This scheme was developed by Yinping Guo and Ying Huang (State Key Laboratory of Microbial Resources, Institute of Microbiology, CAS, China).
2007-01-05A MLSA scheme for Borrelia burgdorferi is now available. This is not strictly a MLST scheme as it uses some non-housekeeping genes for pan-genus taxonomy. The scheme was developed by Danièle Postic, Martine Garnier and Guy Baranton (Pasteur Institute, Paris, France).
2006-12-15A Simple Object Access Protocol (SOAP) Application Programming Interface (API) has been developed to enable software developers to write applications that can query the MLST databases directly without using the standard web interface.
2006-09-05The Wolbachia MLST website has gone live. The scheme was developed by Laura Baldo (University of California, Riverside, CA, USA) and Jack Werren (University of Rochester, NY, USA).
2006-08-11The MLST scheme for Listeria monocytogenes is now available. This scheme was developed by Julio Vazquez and colleagues (Instituto de Salud Carlos III, Madrid, Spain).
2006-08-01The Campylobacter insulaenigrae MLST database has gone live. The scheme was developed by Bill Miller (US Dept. of Agriculture).
2006-06-29It is now possible to select which fields you would like displayed in the main results table following an isolate search. Selections can be made from the 'options' page of the database.
2006-06-21The Aspergillus fumigatus MLST scheme is available. This has been developed by Frank Odds at the University of Aberdeen, UK.
2006-04-26The Candida krusei MLST website has gone live. The scheme was developed by Mette Jacobson and Frank Odds (University of Aberdeen, UK).
2006-01-13The Porphyromonas gingivalis MLST scheme is now available. This has been developed by Morten Enersen and Dominique Caugant at the University of Oslo, Norway.
2006-01-04New functionality has been added to the profiles databases. Using the 'locus explorer' you can now investigate polymorphic sites and, for haploid schemes, codon usage, GC content and translated sequences for each of the loci of a scheme.
2005-10-13We now have a mirror site in the United States (University of Pittsburgh). This mirror can be accessed at usmirror1.pubmlst.org. We are very grateful to Kathleen Shutt for setting this up and to Lee Harrison for agreeing to host the site.
2005-10-13The Acinetobacter baumannii MLST website has gone live. The scheme was developed by Sergio G. Bartual in the laboratory of Francisco Rodríguez-Valera (Miguel Hernandez, Alicante, Spain) and in close collaboration with Harald Seifert (University of Cologne, Germany).
2005-09-12The Burkholderia cepacia complex MLST website is now available. The scheme was developed by Adam Baldwin in the laboratory of Chris Dowson (Warwick University, UK), in close collaboration with Esh Mahenthiralingam (Cardiff University, UK).
2005-07-19The Bordetella MLST profiles database has gone live. This scheme was developed by Dimitri Diavatopoulos and Frits Mooi at the RIVM, Netherlands.
2005-05-25The Streptococcus agalactiae (group B Streptococcus) MLST database has moved to this site.
2005-05-10The Klebsiella pneumoniae MLST databases are now available. This scheme was developed by Sylvain Brisse at the Pasteur Institute, Paris, France.
2005-03-15Web tools for analysis of MLST data are now available. These offer profile split decomposition analysis, tree drawing, BURST, non-redundant allele identification and linkage analysis.
2005-02-10Our first mirror site in the Southern Hemisphere has gone live at the University of Auckland, New Zealand. We are very grateful to Paul Rainey for agreeing to host the site, which can be accessed at http://nzmirror1.pubmlst.org.

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News

The Klebsiella pneumoniae database has moved to the Pasteur MLST site.

The MLST scheme for Arcobacter species is now available. This scheme was developed by William Miller (USDA).

A MLST scheme for Streptococcus zooepidemicus has been developed by Andrew Waller and colleagues at the Animal Health Trust and is now available.

Recent updates

2008-08-19
C. jejuni: 3 STs, 3 isolates

2008-08-18
C. jejuni: 1 allele, 2 STs, 2 isolates

2008-08-15
C. jejuni: 2 isolates
H. pylori: 281 alleles
Neisseria: 12 isolates

Database update activity